Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | BK658_02655 | Not Available | Positive | 549398 - 550597 | 43580.7 |
| hypothetical protein | BK658_02660 | Not Available | Positive | 550584 - 551504 | 34435.5 |
| hypothetical protein | BK658_02665 | Not Available | Negative | 551672 - 551959 | 10190.3 |
| histidine kinase | BK658_02670 | Not Available | Negative | 552144 - 553487 | 50060.1 |
| threonine synthase | BK658_02675 | Not Available | Negative | 553606 - 555015 | 51783.0 |
| homoserine dehydrogenase | BK658_02680 | Not Available | Negative | 555082 - 556386 | 46321.1 |
| protein-disulfide isomerase | BK658_02685 | Not Available | Negative | 556523 - 557254 | 25783.3 |
| site-specific tyrosine recombinase xerd | BK658_02690 | Not Available | Negative | 557601 - 558497 | 33876.1 |
| 50s ribosomal protein l19 | BK658_02695 | Not Available | Negative | 558643 - 558993 | 12998.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | BK658_02700 | Not Available | Negative | 559039 - 559791 | 27949.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
