Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_02500 | Not Available | Negative | 514050 - 514319 | 10021.0 |
| nin-like protein | BK658_02505 | Not Available | Positive | 514410 - 515267 | 32112.0 |
| hypothetical protein | BK658_02510 | Not Available | Positive | 515318 - 515815 | 18086.6 |
| site-specific integrase | BK658_02515 | Not Available | Positive | 516049 - 517179 | 42778.4 |
| ornithine carbamoyltransferase | BK658_02520 | Not Available | Positive | 517397 - 518317 | 34228.3 |
| iron abc transporter atp-binding protein | BK658_02525 | Not Available | Positive | 518314 - 519423 | 40421.3 |
| isomerase | BK658_02530 | Not Available | Negative | 519571 - 520353 | 28571.1 |
| aminoacyl-trna deacylase | BK658_02535 | Not Available | Negative | 520452 - 520922 | 16509.0 |
| hypothetical protein | BK658_02540 | Not Available | Positive | 520921 - 521166 | 8990.0 |
| aquaporin | BK658_02545 | Not Available | Positive | 521293 - 522144 | 29796.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
