Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_02030 | Not Available | Positive | 432385 - 432759 | 13452.0 |
| formyl transferase | BK658_02035 | Not Available | Positive | 433102 - 434820 | 63297.8 |
| glucosidase | BK658_02040 | Not Available | Negative | 434947 - 437571 | 99653.7 |
| lysr family transcriptional regulator | BK658_02045 | Not Available | Positive | 437712 - 438575 | 32720.3 |
| sterol desaturase | BK658_02050 | Not Available | Positive | 438688 - 439842 | 44564.8 |
| hypothetical protein | BK658_02055 | Not Available | Negative | 439920 - 440159 | 9090.71 |
| error-prone dna polymerase | BK658_02060 | Not Available | Negative | 440403 - 443480 | 115175.0 |
| dna repair nucleotidyltransferase | BK658_02065 | Not Available | Negative | 443477 - 444892 | 53132.0 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | BK658_02070 | Not Available | Negative | 444900 - 445517 | 21593.0 |
| repressor lexa | BK658_02075 | Not Available | Negative | 445517 - 446134 | 22483.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
