Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_01980 | Not Available | Positive | 418288 - 418506 | 7832.66 |
| laci family transcriptional regulator | BK658_01985 | Not Available | Negative | 418514 - 419599 | 40117.4 |
| sulfite reductase | BK658_01990 | Not Available | Positive | 420121 - 421779 | 62418.2 |
| oxidoreductase | BK658_01995 | Not Available | Positive | 421763 - 422257 | 18850.1 |
| leucine rich repeat (lrr)-containing protein | BK658_02000 | Not Available | Negative | 422336 - 426169 | 142375.0 |
| protease sohb | BK658_02005 | Not Available | Negative | 426373 - 427395 | 38186.3 |
| histidine phosphatase family protein | BK658_02010 | Not Available | Positive | 427601 - 428311 | 26136.2 |
| scp-2 family sterol carrier protein | BK658_02015 | Not Available | Positive | 428362 - 428676 | 11054.3 |
| amidohydrolase | BK658_02020 | Not Available | Positive | 428872 - 430830 | 72681.1 |
| hypothetical protein | BK658_02025 | Not Available | Negative | 430882 - 431856 | 36380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
