Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit i | BK658_01930 | Not Available | Positive | 405637 - 407064 | 53547.8 |
| hypothetical protein | BK658_01935 | Not Available | Positive | 407123 - 407344 | 7968.59 |
| hypothetical protein | BK658_01940 | Not Available | Negative | 407514 - 408008 | 18146.7 |
| hypothetical protein | BK658_01945 | Not Available | Positive | 408199 - 408411 | 8019.74 |
| dna-binding protein | BK658_01950 | Not Available | Positive | 408660 - 410093 | 52652.6 |
| antibiotic biosynthesis monooxygenase | BK658_01955 | Not Available | Positive | 410218 - 410511 | 10967.9 |
| atpase | BK658_01960 | Not Available | Positive | 410780 - 411487 | 25408.9 |
| chitin-binding protein | BK658_01965 | Not Available | Positive | 411768 - 412358 | 22289.2 |
| nad-glutamate dehydrogenase | BK658_01970 | Not Available | Negative | 412441 - 417342 | 183372.0 |
| hypothetical protein | BK658_01975 | Not Available | Positive | 417848 - 418204 | 12958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
