Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BK658_01880 | Not Available | Negative | 388786 - 390867 | 74761.2 |
| rnd transporter | BK658_01885 | Not Available | Negative | 391062 - 392555 | 54175.9 |
| acriflavine resistance protein b | BK658_01890 | Not Available | Negative | 392552 - 395659 | 112388.0 |
| multidrug transporter subunit mdtc | BK658_01895 | Not Available | Negative | 395656 - 398760 | 111567.0 |
| efflux transporter periplasmic adaptor subunit | BK658_01900 | Not Available | Negative | 398757 - 400073 | 46544.5 |
| lipid hydroperoxide peroxidase | BK658_01905 | Not Available | Negative | 400254 - 400754 | 17511.9 |
| polyketide cyclase | BK658_01910 | Not Available | Negative | 401009 - 401452 | 16707.4 |
| cell envelope protein | BK658_01915 | Not Available | Positive | 401725 - 403131 | 52305.2 |
| oxidoreductase | BK658_01920 | Not Available | Negative | 403208 - 403702 | 18858.0 |
| sulfite reductase | BK658_01925 | Not Available | Negative | 403699 - 405372 | 62349.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
