Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK658_01830 | Not Available | Negative | 373715 - 374422 | 26345.2 |
| pp_00359 | BK658_01835 | Not Available | Negative | 374577 - 375188 | Not Available |
| universal stress protein uspa | BK658_01840 | Not Available | Positive | 375416 - 376282 | 31376.8 |
| 1,4-alpha-glucan branching enzyme | BK658_01845 | Not Available | Negative | 376366 - 378600 | 83717.9 |
| maltose alpha-d-glucosyltransferase | BK658_01850 | Not Available | Negative | 378597 - 381938 | 125295.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | BK658_01855 | Not Available | Negative | 382131 - 384128 | 75619.8 |
| duf3203 domain-containing protein | BK658_01860 | Not Available | Positive | 384337 - 384570 | 8420.93 |
| cytochrome c oxidase accessory protein ccog | BK658_01865 | Not Available | Positive | 384766 - 386178 | 52437.8 |
| gntr family transcriptional regulator | BK658_01870 | Not Available | Positive | 386414 - 387823 | 52158.2 |
| oxidoreductase | BK658_01875 | Not Available | Negative | 387946 - 388692 | 26211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
