Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_01680 | Not Available | Negative | 340127 - 340369 | 8606.0 |
| hypothetical protein | BK658_01685 | Not Available | Negative | 340382 - 340900 | 18198.8 |
| sam-dependent methyltransferase | BK658_01690 | Not Available | Negative | 341288 - 341884 | 21439.7 |
| hypothetical protein | BK658_01695 | Not Available | Negative | 342176 - 342667 | 18382.5 |
| saccharopine dehydrogenase | BK658_01700 | Not Available | Negative | 342670 - 343797 | 40092.6 |
| d-alanyl-d-alanine dipeptidase | BK658_01705 | Not Available | Positive | 344042 - 345466 | 52692.7 |
| sodium-independent anion transporter | BK658_01710 | Not Available | Negative | 345522 - 346967 | 51328.8 |
| glyoxalase-like domain protein | BK658_01715 | Not Available | Negative | 347135 - 347791 | 24323.9 |
| duf1289 domain-containing protein | BK658_01720 | Not Available | Negative | 347868 - 348050 | 6943.7 |
| hypothetical protein | BK658_01725 | Not Available | Negative | 348054 - 348425 | 13928.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
