Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_01630 | Not Available | Positive | 329676 - 330569 | 32060.7 |
| arac family transcriptional regulator | BK658_01635 | Not Available | Negative | 330600 - 331214 | 21725.4 |
| gntr family transcriptional regulator | BK658_01640 | Not Available | Positive | 331327 - 332661 | 48060.9 |
| thioesterase | BK658_01645 | Not Available | Positive | 333007 - 333579 | 22286.0 |
| lysine transporter lyse | BK658_01650 | Not Available | Negative | 333642 - 334268 | 21865.4 |
| lysr family transcriptional regulator | BK658_01655 | Not Available | Negative | 334601 - 335518 | 33634.0 |
| mfs transporter | BK658_01660 | Not Available | Positive | 335695 - 337023 | 47436.1 |
| coa transferase | BK658_01665 | Not Available | Positive | 337058 - 338314 | 44725.5 |
| methylmalonyl-coa decarboxylase | BK658_01670 | Not Available | Positive | 338311 - 339111 | 28866.8 |
| hypothetical protein | BK658_01675 | Not Available | Positive | 339272 - 339511 | 8757.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
