Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter acrb | BK658_01580 | Not Available | Positive | 316570 - 319668 | 112913.0 |
| trna (adenine-n(1))-methyltransferase | BK658_01585 | Not Available | Negative | 319768 - 320541 | 28622.6 |
| alpha/beta hydrolase | BK658_01590 | Not Available | Positive | 320879 - 321946 | 38607.8 |
| calpastatin | BK658_01595 | Not Available | Positive | 322377 - 322802 | 16040.2 |
| isochorismatase | BK658_01600 | Not Available | Positive | 322945 - 323565 | 21903.6 |
| catalase/peroxidase hpi | BK658_01605 | Not Available | Negative | 323839 - 326073 | 81089.3 |
| hypothetical protein | BK658_01610 | Not Available | Positive | 326432 - 327112 | 25224.0 |
| dienelactone hydrolase | BK658_01615 | Not Available | Positive | 327242 - 328129 | 32482.5 |
| antibiotic biosynthesis monooxygenase | BK658_01620 | Not Available | Negative | 328200 - 328778 | 21814.5 |
| hydrolase | BK658_01625 | Not Available | Negative | 328855 - 329499 | 24060.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
