Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | BK658_01530 | Not Available | Negative | 302805 - 304706 | 69456.3 |
| fumarylacetoacetate hydrolase | BK658_01535 | Not Available | Negative | 304706 - 305662 | 35192.4 |
| glyoxalase | BK658_01540 | Not Available | Negative | 305745 - 306836 | 40704.8 |
| tetr family transcriptional regulator | BK658_01545 | Not Available | Negative | 306924 - 307538 | 22518.8 |
| tetr family transcriptional regulator | BK658_01550 | Not Available | Negative | 307790 - 308434 | 23238.0 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | BK658_01555 | Not Available | Negative | 308437 - 310095 | 61316.6 |
| transcriptional regulator | BK658_01560 | Not Available | Positive | 310435 - 313335 | 107070.0 |
| hypothetical protein | BK658_01565 | Not Available | Positive | 313592 - 313807 | 7632.88 |
| rnd transporter | BK658_01570 | Not Available | Positive | 313925 - 315430 | 53071.8 |
| efflux transporter periplasmic adaptor subunit | BK658_01575 | Not Available | Positive | 315461 - 316573 | 39391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
