Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | BK658_01430 | Not Available | Negative | 285169 - 286347 | 42536.9 |
| cystathionine beta-synthase | BK658_01435 | Not Available | Negative | 286344 - 287720 | 49462.3 |
| peroxiredoxin | BK658_01440 | Not Available | Positive | 288164 - 288610 | 15890.9 |
| peroxiredoxin | BK658_01445 | Not Available | Positive | 288814 - 289260 | 15940.1 |
| marr family transcriptional regulator | BK658_01450 | Not Available | Positive | 289646 - 290104 | 17018.7 |
| short-chain dehydrogenase | BK658_01455 | Not Available | Positive | 290199 - 290903 | 24394.1 |
| hypothetical protein | BK658_01460 | Not Available | Negative | 290983 - 291318 | 12104.7 |
| hypothetical protein | BK658_01465 | Not Available | Positive | 291958 - 292404 | 15811.0 |
| cell division protein zipa | BK658_01470 | Not Available | Negative | 292526 - 293026 | 18220.6 |
| hypothetical protein | BK658_01475 | Not Available | Negative | 293119 - 293298 | 6686.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
