Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_01325 | Not Available | Positive | 264545 - 264886 | 12281.5 |
| hypothetical protein | BK658_01330 | Not Available | Positive | 264986 - 266242 | 46556.1 |
| cation transporter | BK658_01340 | Not Available | Positive | 267531 - 270689 | 114312.0 |
| heat-shock protein htpx | BK658_01345 | Not Available | Positive | 270686 - 271042 | 12511.5 |
| lactate permease | BK658_01350 | Not Available | Positive | 271302 - 273065 | 62917.0 |
| mate family efflux transporter | BK658_01355 | Not Available | Negative | 273155 - 274513 | 48024.7 |
| ketosteroid isomerase | BK658_01360 | Not Available | Negative | 274779 - 275195 | 14964.7 |
| ketosteroid isomerase | BK658_01365 | Not Available | Negative | 275243 - 275668 | 15155.3 |
| nadp oxidoreductase coenzyme | BK658_01370 | Not Available | Negative | 275725 - 276324 | 20665.7 |
| oxidoreductase | BK658_01375 | Not Available | Negative | 276396 - 277130 | 24989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
