Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 32 | BK658_01275 | Not Available | Negative | 254801 - 256276 | 55902.8 |
| mfs transporter | BK658_01280 | Not Available | Negative | 256290 - 257582 | 47255.0 |
| porin | BK658_01285 | Not Available | Positive | 257745 - 259358 | 59326.1 |
| lysr family transcriptional regulator | BK658_01290 | Not Available | Negative | 259398 - 260303 | 32991.5 |
| hypothetical protein | BK658_01295 | Not Available | Positive | 260410 - 261318 | 31846.0 |
| thioesterase | BK658_01300 | Not Available | Negative | 261410 - 261814 | 14739.0 |
| dioxygenase | BK658_01305 | Not Available | Negative | 261837 - 262607 | 28886.5 |
| cell wall hydrolase | BK658_01310 | Not Available | Negative | 262706 - 263326 | 22608.9 |
| hypothetical protein | BK658_01315 | Not Available | Positive | 263567 - 263884 | 11309.3 |
| hypothetical protein | BK658_01320 | Not Available | Positive | 264063 - 264398 | 12144.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
