Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK658_01175 | Not Available | Positive | 236897 - 237916 | 37745.4 |
| microcin abc transporter atp-binding protein | BK658_01180 | Not Available | Positive | 237918 - 239528 | 59190.5 |
| enoyl-[acyl-carrier-protein] reductase | BK658_01185 | Not Available | Positive | 239548 - 240342 | 28036.5 |
| lysr family transcriptional regulator | BK658_01190 | Not Available | Negative | 240518 - 241384 | 32084.5 |
| glyoxalase | BK658_01195 | Not Available | Positive | 241499 - 241924 | 15981.1 |
| hypothetical protein | BK658_01200 | Not Available | Negative | 241961 - 242539 | 20166.0 |
| twin-arginine translocation pathway signal protein | BK658_01205 | Not Available | Negative | 242541 - 244709 | 76939.5 |
| (2fe-2s)-binding protein | BK658_01210 | Not Available | Negative | 244712 - 245173 | 15931.2 |
| short-chain dehydrogenase | BK658_01215 | Not Available | Negative | 245360 - 246514 | 42126.6 |
| hypothetical protein | BK658_01220 | Not Available | Positive | 246720 - 247028 | 11809.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
