Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BK658_01075 | Not Available | Negative | 215539 - 216153 | 22987.4 |
| lysine decarboxylase | BK658_01080 | Not Available | Negative | 216168 - 218423 | 82892.5 |
| hypothetical protein | BK658_01085 | Not Available | Positive | 218422 - 218676 | 9313.41 |
| dna polymerase iii subunit epsilon | BK658_01090 | Not Available | Negative | 218673 - 219431 | 27366.4 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | BK658_01095 | Not Available | Negative | 219624 - 220397 | 27889.3 |
| nadh oxidase | BK658_01100 | Not Available | Negative | 220551 - 221564 | 36344.2 |
| benzoate 1,2-dioxygenase small subunit | BK658_01105 | Not Available | Negative | 221575 - 222063 | 19184.3 |
| benzoate 1,2-dioxygenase large subunit | BK658_01110 | Not Available | Negative | 222060 - 223424 | 51973.7 |
| arac family transcriptional regulator | BK658_01115 | Not Available | Negative | 223657 - 224613 | 36518.8 |
| catechol 1,2-dioxygenase | BK658_01120 | Not Available | Negative | 224769 - 225698 | 34391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
