Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoicase | BK658_00865 | Not Available | Negative | 178155 - 179150 | 36691.3 |
| ohcu decarboxylase | BK658_00870 | Not Available | Negative | 179240 - 179755 | 18969.5 |
| allantoinase | BK658_00875 | Not Available | Negative | 179752 - 180678 | 35570.0 |
| hydroxyisourate hydrolase | BK658_00880 | Not Available | Positive | 181114 - 181467 | 12891.2 |
| lysine transporter lyse | BK658_00885 | Not Available | Negative | 181679 - 182305 | 22250.5 |
| guanine permease | BK658_00890 | Not Available | Negative | 182371 - 183720 | 47106.1 |
| marr family transcriptional regulator | BK658_00895 | Not Available | Negative | 184053 - 184487 | 16348.9 |
| glutaredoxin | BK658_00905 | Not Available | Negative | 185935 - 186306 | 14016.3 |
| gtp cyclohydrolase i fole | BK658_00910 | Not Available | Negative | 186410 - 186955 | 20099.6 |
| dna mismatch repair protein muts | BK658_00915 | Not Available | Negative | 187033 - 187590 | 20788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
