Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | BK658_00660 | Not Available | Positive | 133210 - 133923 | 25104.1 |
| hypothetical protein | BK658_00665 | Not Available | Positive | 134217 - 134672 | 17167.2 |
| transcriptional regulator | BK658_00670 | Not Available | Positive | 134788 - 135129 | 12359.7 |
| hypothetical protein | BK658_00675 | Not Available | Positive | 135126 - 135497 | 13760.3 |
| hypothetical protein | BK658_00680 | Not Available | Positive | 135498 - 135899 | 14771.8 |
| type iv secretion protein rhs | BK658_00685 | Not Available | Positive | 136129 - 140994 | 182127.0 |
| hypothetical protein | BK658_00690 | Not Available | Positive | 140998 - 141405 | 15471.2 |
| diguanylate phosphodiesterase | BK658_00695 | Not Available | Negative | 141429 - 143204 | 65724.9 |
| tail-specific protease | BK658_00700 | Not Available | Negative | 143332 - 145452 | 79202.8 |
| nad(p)h-quinone oxidoreductase | BK658_00705 | Not Available | Positive | 145640 - 146602 | 33559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
