Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol acyltransferase | BK658_00610 | Not Available | Positive | 124692 - 126566 | 68757.1 |
| qace family quaternary ammonium compound efflux smr transporter | BK658_00615 | Not Available | Negative | 126674 - 126988 | 10769.8 |
| sodium transporter | BK658_00620 | Not Available | Negative | 127107 - 128072 | 34306.1 |
| recombination-associated protein rdgc | BK658_00625 | Not Available | Negative | 128218 - 129138 | 34221.3 |
| Trna-val | Not Available | Not Available | Positive | 129299 - 129374 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 129394 - 129470 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 129657 - 129732 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 129752 - 129828 | Not Available |
| catalase | BK658_00650 | Not Available | Negative | 129966 - 131102 | 42440.5 |
| hypothetical protein | BK658_00655 | Not Available | Negative | 131131 - 132939 | 66861.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
