Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK658_00560 | Not Available | Positive | 111032 - 112240 | 42622.4 |
| long-chain fatty acid transport protein | BK658_00565 | Not Available | Negative | 112447 - 113718 | 45420.9 |
| hypothetical protein | BK658_00570 | Not Available | Negative | 113864 - 114346 | 17853.5 |
| hypothetical protein | BK658_00575 | Not Available | Negative | 114625 - 114849 | 8292.97 |
| hypothetical protein | BK658_00580 | Not Available | Positive | 115867 - 116190 | 11951.5 |
| recombinase rmuc | BK658_00585 | Not Available | Positive | 116252 - 117730 | 55338.5 |
| hybrid sensor histidine kinase/response regulator | BK658_00590 | Not Available | Negative | 117797 - 121267 | 126729.0 |
| tetr family transcriptional regulator | BK658_00595 | Not Available | Negative | 121474 - 122013 | 19681.6 |
| mfs transporter | BK658_00600 | Not Available | Positive | 122105 - 123301 | 41608.9 |
| c4-dicarboxylate abc transporter | BK658_00605 | Not Available | Positive | 123456 - 124607 | 41556.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
