Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5,6-dimethylbenzimidazole synthase | BK658_00515 | Not Available | Positive | 103475 - 104125 | 24316.5 |
| cobalamin biosynthesis protein | BK658_00520 | Not Available | Positive | 104122 - 105030 | 32940.7 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 104738 - 105091 | Not Available |
| threonine-phosphate decarboxylase | BK658_00525 | Not Available | Positive | 105023 - 106015 | 37042.4 |
| cobyric acid synthase cobq | BK658_00530 | Not Available | Positive | 106012 - 107463 | 51848.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | BK658_00535 | Not Available | Positive | 107598 - 108119 | 19000.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BK658_00540 | Not Available | Positive | 108116 - 109171 | 36278.9 |
| histidine phosphatase family protein | BK658_00545 | Not Available | Positive | 109168 - 109743 | 20943.2 |
| adenosylcobinamide-gdp ribazoletransferase | BK658_00550 | Not Available | Positive | 109746 - 110477 | 25632.6 |
| marr family transcriptional regulator | BK658_00555 | Not Available | Positive | 110560 - 110964 | 14717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
