Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase | BK658_00315 | Not Available | Negative | 63954 - 64679 | 26811.2 |
| dienelactone hydrolase | BK658_00320 | Not Available | Negative | 64864 - 65655 | 27899.4 |
| dna-binding response regulator | BK658_00325 | Not Available | Positive | 65894 - 66571 | 25471.7 |
| histidine kinase | BK658_00330 | Not Available | Positive | 66568 - 67914 | 50595.1 |
| arac family transcriptional regulator | BK658_00335 | Not Available | Negative | 67969 - 68967 | 38142.6 |
| c4-dicarboxylate transporter dcta | BK658_00340 | Not Available | Positive | 69304 - 70638 | 46882.9 |
| carnitine dehydratase | BK658_00345 | Not Available | Positive | 70783 - 71964 | 42447.2 |
| sprt family protein | BK658_00350 | Not Available | Negative | 72073 - 72567 | 19469.4 |
| hypothetical protein | BK658_00355 | Not Available | Negative | 72752 - 73354 | 21681.9 |
| trna 2-thiocytidine(32) synthetase ttca | BK658_00360 | Not Available | Positive | 73686 - 74510 | 31186.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
