Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BK658_24555 | Not Available | Negative | 5336220 - 5337254 | 38089.4 |
| Hypothetical protein | BK658_24560 | Not Available | Negative | 5337602 - 5338294 | 25815.7 |
| hypothetical | BK658_24565 | Not Available | Negative | 5338324 - 5338691 | 13106.3 |
| Paar repeat-containing protein | BK658_24570 | Not Available | Positive | 5339020 - 5340174 | 40699.8 |
| Attr | Not Available | Not Available | Positive | 5340643 - 5340654 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3 - 118 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 258 - 3173 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | BK658_00005 | Not Available | Negative | 140 - 649 | 18898.6 |
| threonine aldolase | BK658_00010 | Not Available | Positive | 1156 - 2160 | 36035.3 |
| alanine--trna ligase | BK658_00015 | Not Available | Positive | 2307 - 4928 | 94493.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
