Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_24355 | Not Available | Negative | 5302499 - 5302771 | 9970.08 |
| Nucleoside hydrolase | BK658_24360 | Not Available | Negative | 5302782 - 5303348 | 20777.7 |
| hypothetical protein | BK658_24365 | Not Available | Negative | 5303345 - 5303545 | 7110.66 |
| Putative repressor protein | BK658_24370 | Not Available | Negative | 5303704 - 5304426 | 26579.6 |
| Prophage antirepressor | BK658_24375 | Not Available | Positive | 5304543 - 5304752 | 7210.85 |
| hypothetical protein | BK658_24380 | Not Available | Positive | 5304893 - 5305381 | 17973.7 |
| Trar/dksa c4-type zinc finger protein | BK658_24385 | Not Available | Positive | 5305374 - 5305580 | 7811.23 |
| Integrase | BK658_24390 | Not Available | Positive | 5305577 - 5308276 | 100319.0 |
| hypothetical protein | BK658_24395 | Not Available | Positive | 5308605 - 5309087 | 17393.1 |
| pyocin r2, holin | BK658_24400 | Not Available | Positive | 5309277 - 5309621 | 12098.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
