Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 5288210 - 5288221 | Not Available |
| Atp-dependent dna helicase | BK658_24310 | Not Available | Negative | 5295480 - 5297216 | 64414.2 |
| trna dihydrouridine(20/20a) synthase dusa | BK658_24315 | Not Available | Negative | 5297429 - 5298367 | 34352.5 |
| Putative integrase | BK658_24320 | Not Available | Positive | 5298542 - 5299666 | 43199.6 |
| Excisionase | BK658_24325 | Not Available | Negative | 5299668 - 5299943 | 10259.6 |
| hypothetical protein | BK658_24330 | Not Available | Negative | 5300110 - 5300526 | 15146.2 |
| Duf2303 protein | BK658_24335 | Not Available | Negative | 5300604 - 5301425 | 30911.7 |
| Hypothetical protein | BK658_24340 | Not Available | Negative | 5301477 - 5301821 | 12624.1 |
| transcriptional regulator | BK658_24345 | Not Available | Negative | 5301880 - 5302122 | 9049.94 |
| hypothetical protein | BK658_24350 | Not Available | Negative | 5302119 - 5302502 | 13449.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
