Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter atp-binding protein | BK654_05440 | Not Available | Positive | 1294751 - 1295533 | 28088.0 |
| hypothetical protein | BK654_05445 | Not Available | Positive | 1295526 - 1296314 | 27341.0 |
| hypothetical protein | BK654_05450 | Not Available | Positive | 1296352 - 1297065 | 25641.8 |
| catalase hpii | BK654_05455 | Not Available | Negative | 1297200 - 1299338 | 78449.9 |
| methionine abc transporter atp-binding protein | BK654_05460 | Not Available | Positive | 1299601 - 1300608 | 36673.3 |
| metal abc transporter permease | BK654_05465 | Not Available | Positive | 1300608 - 1301282 | 24087.5 |
| methionine abc transporter substrate-binding protein | BK654_05470 | Not Available | Positive | 1301362 - 1302135 | 27768.6 |
| hypothetical protein | BK654_05475 | Not Available | Positive | 1302494 - 1303051 | 20056.8 |
| hypothetical protein | BK654_05480 | Not Available | Positive | 1303215 - 1303553 | 12442.7 |
| glutathione s-transferase | BK654_05485 | Not Available | Negative | 1303637 - 1304332 | 25715.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
