Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion protein | BK658_02290 | Not Available | Negative | 484515 - 485018 | 18249.8 |
| hypothetical protein | BK658_02295 | Not Available | Negative | 485081 - 485653 | 20708.4 |
| Major capsid protein | BK658_02300 | Not Available | Negative | 485700 - 486665 | 34187.3 |
| Hypothetical protein | BK658_02305 | Not Available | Negative | 486678 - 487406 | 26037.7 |
| Putative head protein | BK658_02310 | Not Available | Negative | 487489 - 488574 | 39605.5 |
| Portal protein | BK658_02315 | Not Available | Negative | 488549 - 489964 | 51831.4 |
| Terminase large subunit | BK658_02320 | Not Available | Negative | 489961 - 491448 | 57027.5 |
| Terminase small subunit | BK658_02325 | Not Available | Negative | 491450 - 491971 | 18869.2 |
| hypothetical protein | BK658_02330 | Not Available | Negative | 492373 - 492567 | 6580.1 |
| Hypothetical protein | BK658_02335 | Not Available | Negative | 492567 - 492863 | 10611.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
