Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | BK659_26565 | Not Available | Positive | 5968957 - 5970303 | 50032.4 |
| cytoplasmic protein | BK659_26570 | Not Available | Negative | 5970438 - 5971667 | 46194.7 |
| hypothetical protein | BK659_26575 | Not Available | Negative | 5971732 - 5971947 | 8336.08 |
| lysr family transcriptional regulator | BK659_26580 | Not Available | Positive | 5972009 - 5972899 | 33233.4 |
| hypothetical protein | BK659_26585 | Not Available | Negative | 5972889 - 5973638 | 26147.1 |
| marr family transcriptional regulator | BK659_26590 | Not Available | Positive | 5973796 - 5974257 | 17220.9 |
| organic hydroperoxide resistance protein | BK659_26595 | Not Available | Positive | 5974501 - 5974920 | 14230.8 |
| Diguanylate cyclase | BK658_02175 | Not Available | Positive | 463738 - 465285 | 57295.0 |
| pyocin | BK658_02180 | Not Available | Positive | 465685 - 467028 | 46831.4 |
| bacteriocin immunity protein | BK658_02185 | Not Available | Positive | 467036 - 467308 | 10084.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
