Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | BK659_26310 | Not Available | Positive | 5917093 - 5917959 | 31244.0 |
| thiol:disulfide interchange protein dsbg | BK659_26315 | Not Available | Positive | 5917935 - 5918702 | 27906.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | BK659_26320 | Not Available | Negative | 5918821 - 5919633 | 29818.1 |
| hypothetical protein | BK659_26325 | Not Available | Positive | 5919911 - 5920159 | 9034.57 |
| rna polymerase factor sigma-70 | BK659_26330 | Not Available | Positive | 5920271 - 5920819 | 20471.6 |
| amino acid abc transporter substrate-binding protein | BK659_26335 | Not Available | Negative | 5920875 - 5921669 | 29911.9 |
| tetr family transcriptional regulator | BK659_26340 | Not Available | Negative | 5921772 - 5922395 | 23326.2 |
| terpene utilization protein atua | BK659_26345 | Not Available | Positive | 5922575 - 5924365 | 63705.7 |
| 2,4-dienoyl-coa reductase | BK659_26350 | Not Available | Positive | 5924378 - 5925247 | 30589.5 |
| acetyl-coa carboxylase carboxyltransferase subunit | BK659_26355 | Not Available | Positive | 5925251 - 5926867 | 57805.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
