Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | BK659_26195 | Not Available | Negative | 5876714 - 5881360 | 174949.0 |
| hypothetical protein | BK659_26200 | Not Available | Positive | 5882358 - 5887493 | 187904.0 |
| hypothetical protein | BK659_26205 | Not Available | Positive | 5887605 - 5892182 | 169953.0 |
| hypothetical protein | BK659_26210 | Not Available | Positive | 5892267 - 5893808 | 55868.1 |
| eama family transporter | BK659_26230 | Not Available | Positive | 5901934 - 5902821 | 30862.1 |
| hypothetical protein | BK659_26235 | Not Available | Positive | 5902988 - 5903269 | 9806.87 |
| tetr family transcriptional regulator | BK659_26240 | Not Available | Negative | 5903282 - 5903851 | 20774.8 |
| glucose 1-dehydrogenase | BK659_26245 | Not Available | Positive | 5903943 - 5904683 | 27021.3 |
| disulfide bond formation protein dsba | BK659_26250 | Not Available | Positive | 5904721 - 5905311 | 21988.5 |
| quinone oxidoreductase | BK659_26255 | Not Available | Negative | 5905308 - 5906306 | 35063.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
