Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(beta-d-mannuronate) c5 epimerase | BK659_26145 | Not Available | Positive | 5865781 - 5867400 | 59507.0 |
| alginate o-acetyltransferase | BK659_26150 | Not Available | Positive | 5867412 - 5868860 | 53450.1 |
| poly(beta-d-mannuronate) lyase | BK659_26155 | Not Available | Positive | 5868869 - 5869993 | 41898.6 |
| membrane-bound o-acyltransferase family protein | BK659_26160 | Not Available | Positive | 5870205 - 5871683 | 55920.4 |
| alginate o-acetyltransferase | BK659_26165 | Not Available | Positive | 5871695 - 5872870 | 43778.1 |
| alginate o-acetyltransferase | BK659_26170 | Not Available | Positive | 5872885 - 5873541 | 23005.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BK659_26175 | Not Available | Positive | 5873755 - 5875206 | 53943.5 |
| hypothetical protein | BK659_26180 | Not Available | Negative | 5875379 - 5875741 | 13894.2 |
| hypothetical protein | BK659_26185 | Not Available | Negative | 5875764 - 5876249 | 18050.9 |
| hypothetical protein | BK659_26190 | Not Available | Negative | 5876337 - 5876729 | 14319.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
