Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK659_25995 | Not Available | Negative | 5831759 - 5832391 | 22756.1 |
| hypothetical protein | BK659_26000 | Not Available | Positive | 5832834 - 5833463 | 21880.1 |
| fimbrial chaperone protein | BK659_26005 | Not Available | Positive | 5833561 - 5834277 | 25821.4 |
| outer membrane usher protein | BK659_26010 | Not Available | Positive | 5834416 - 5836884 | 88151.4 |
| hypothetical protein | BK659_26015 | Not Available | Positive | 5836895 - 5838037 | 40612.0 |
| cyanate transporter | BK659_26020 | Not Available | Negative | 5838133 - 5839449 | 45922.0 |
| gntr family transcriptional regulator | BK659_26025 | Not Available | Negative | 5839439 - 5840098 | 24827.8 |
| motility quorum-sensing regulator mqsr | BK659_26030 | Not Available | Positive | 5840265 - 5840576 | 11896.3 |
| transcriptional regulator | BK659_26035 | Not Available | Positive | 5840573 - 5841055 | 18325.8 |
| glutamine abc transporter atp-binding protein | BK659_26040 | Not Available | Negative | 5841120 - 5841884 | 28864.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
