Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | BK659_25945 | Not Available | Positive | 5822166 - 5822573 | 14679.3 |
| valine--trna ligase | BK659_25950 | Not Available | Positive | 5822784 - 5825630 | 107356.0 |
| hypothetical protein | BK659_25955 | Not Available | Positive | 5825890 - 5826273 | 14297.9 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | BK659_25960 | Not Available | Positive | 5826467 - 5827489 | 37957.6 |
| dipicolinate synthase | BK659_25965 | Not Available | Negative | 5827674 - 5827955 | 9671.8 |
| nucleoid-associated protein yejk | BK659_25970 | Not Available | Positive | 5828328 - 5829332 | 37473.1 |
| nrdh-redoxin | BK659_25975 | Not Available | Positive | 5829332 - 5829682 | 13180.1 |
| glutathione s-transferase | BK659_25980 | Not Available | Negative | 5829784 - 5830719 | 34119.9 |
| hypothetical protein | BK659_25985 | Not Available | Negative | 5830807 - 5831127 | 11476.8 |
| duf4440 domain-containing protein | BK659_25990 | Not Available | Negative | 5831167 - 5831637 | 17647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
