Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | BK659_25895 | Not Available | Negative | 5811431 - 5812177 | 26826.3 |
| dna repair protein reco | BK659_25900 | Not Available | Negative | 5812229 - 5812918 | 25099.3 |
| gtpase era | BK659_25905 | Not Available | Negative | 5813093 - 5813995 | 33939.1 |
| ribonuclease iii | BK659_25910 | Not Available | Negative | 5813988 - 5814677 | 25537.7 |
| signal peptidase i | BK659_25915 | Not Available | Negative | 5814856 - 5815710 | 31932.2 |
| elongation factor 4 | BK659_25920 | Not Available | Negative | 5815716 - 5817515 | 66368.2 |
| lps export abc transporter permease lptg | BK659_25925 | Not Available | Negative | 5817687 - 5818748 | 38563.4 |
| lps export abc transporter permease lptf | BK659_25930 | Not Available | Negative | 5818741 - 5819859 | 41246.2 |
| leucyl aminopeptidase | BK659_25935 | Not Available | Positive | 5820179 - 5821669 | 52486.6 |
| dna polymerase iii subunit chi | BK659_25940 | Not Available | Positive | 5821730 - 5822158 | 16194.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
