Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | BK659_25795 | Not Available | Negative | 5786389 - 5787765 | 49364.9 |
| inner membrane protein ypjd | BK659_25800 | Not Available | Positive | 5787974 - 5788786 | 29404.1 |
| transporter | BK659_25805 | Not Available | Positive | 5788799 - 5790064 | 46367.0 |
| mfs transporter | BK659_25810 | Not Available | Positive | 5790136 - 5791452 | 46642.7 |
| phosphoribosylglycinamide formyltransferase 2 | BK659_25815 | Not Available | Negative | 5791633 - 5792814 | 42391.0 |
| preq0 transporter | BK659_25820 | Not Available | Negative | 5792914 - 5793381 | 16880.0 |
| duf1289 domain-containing protein | BK659_25825 | Not Available | Negative | 5793590 - 5793805 | 8017.58 |
| gamma carbonic anhydrase family protein | BK659_25830 | Not Available | Negative | 5793802 - 5794326 | 18717.6 |
| coenzyme a pyrophosphatase | BK659_25835 | Not Available | Negative | 5794395 - 5794994 | 22467.9 |
| nudix hydrolase | BK659_25840 | Not Available | Positive | 5795142 - 5795693 | 20831.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
