Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-aminobutyraldehyde dehydrogenase | BK659_25645 | Not Available | Positive | 5755522 - 5756982 | 52141.5 |
| spermidine/putrescine abc transporter substrate-binding protein | BK659_25650 | Not Available | Positive | 5757069 - 5758220 | 41923.7 |
| polyamine abc transporter atp-binding protein | BK659_25655 | Not Available | Positive | 5758326 - 5759363 | 38321.0 |
| spermidine/putrescine abc transporter permease | BK659_25660 | Not Available | Positive | 5759365 - 5760312 | 34428.1 |
| spermidine/putrescine abc transporter permease | BK659_25665 | Not Available | Positive | 5760302 - 5761126 | 29503.8 |
| gamma-aminobutyraldehyde dehydrogenase | BK659_25670 | Not Available | Positive | 5761303 - 5762727 | 51074.2 |
| amino acid permease | BK659_25675 | Not Available | Positive | 5762962 - 5764443 | 52818.7 |
| hypothetical protein | BK659_25680 | Not Available | Negative | 5764485 - 5765111 | 23740.7 |
| atpase | BK659_25685 | Not Available | Negative | 5765114 - 5766364 | 46987.0 |
| hypothetical protein | BK659_25690 | Not Available | Negative | 5766666 - 5766854 | 7207.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
