Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s metabolism protein sufe | BK659_25445 | Not Available | Positive | 5708447 - 5708851 | 14662.4 |
| trna threonylcarbamoyladenosine dehydratase | BK659_25450 | Not Available | Negative | 5708942 - 5709760 | 29295.6 |
| beta-(1-3)-glucosyl transferase | BK659_25455 | Not Available | Positive | 5710023 - 5712614 | 97261.8 |
| succinyl-diaminopimelate desuccinylase | BK659_25460 | Not Available | Positive | 5712814 - 5713965 | 41047.8 |
| sam-dependent methyltransferase | BK659_25465 | Not Available | Positive | 5713965 - 5714774 | 29865.7 |
| hypothetical protein | BK659_25470 | Not Available | Positive | 5714874 - 5715251 | 14037.4 |
| cold shock domain protein cspd | BK659_25475 | Not Available | Negative | 5715419 - 5715628 | 7641.87 |
| glycerol-3-phosphate 1-o-acyltransferase | BK659_25480 | Not Available | Positive | 5715876 - 5718389 | 95186.7 |
| hypothetical protein | BK659_25485 | Not Available | Positive | 5718439 - 5719128 | 23620.8 |
| hypothetical protein | BK659_25490 | Not Available | Positive | 5719636 - 5720007 | 13246.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
