Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | BK659_25345 | Not Available | Negative | 5686162 - 5686938 | 28162.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | BK659_25350 | Not Available | Negative | 5686935 - 5687375 | 16685.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | BK659_25355 | Not Available | Negative | 5687484 - 5688539 | 36269.4 |
| hypothetical protein | BK659_25360 | Not Available | Negative | 5688543 - 5689046 | 18905.2 |
| outer membrane protein assembly factor bama | BK659_25365 | Not Available | Negative | 5689092 - 5691470 | 87112.5 |
| rip metalloprotease rsep | BK659_25370 | Not Available | Negative | 5691545 - 5692897 | 48587.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BK659_25375 | Not Available | Negative | 5692952 - 5694142 | 42454.4 |
| phosphatidate cytidylyltransferase | BK659_25380 | Not Available | Negative | 5694139 - 5694945 | 28775.3 |
| di-trans,poly-cis-decaprenylcistransferase | BK659_25385 | Not Available | Negative | 5694945 - 5695700 | 28174.8 |
| ribosome recycling factor | BK659_25390 | Not Available | Negative | 5695718 - 5696275 | 20440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
