Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtw domain-containing protein | BK659_25035 | Not Available | Negative | 5626524 - 5627282 | 28693.4 |
| hypothetical protein | BK659_25040 | Not Available | Positive | 5627472 - 5627897 | 15432.6 |
| hypothetical protein | BK659_25045 | Not Available | Negative | 5627910 - 5628104 | 7513.84 |
| protein-l-isoaspartate o-methyltransferase | BK659_25260 | Not Available | Negative | 5666370 - 5667047 | 25110.6 |
| 5'/3'-nucleotidase sure | BK659_25265 | Not Available | Negative | 5667047 - 5667796 | 26358.4 |
| trna pseudouridine(13) synthase trud | BK659_25270 | Not Available | Negative | 5667784 - 5668842 | 38810.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BK659_25275 | Not Available | Negative | 5668839 - 5669312 | 16782.3 |
| s-formylglutathione hydrolase | BK659_25280 | Not Available | Negative | 5669365 - 5670210 | 31118.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | BK659_25285 | Not Available | Negative | 5670219 - 5671331 | 39144.6 |
| lysr family transcriptional regulator | BK659_25290 | Not Available | Positive | 5671438 - 5672334 | 33931.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
