Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kup | BK659_24985 | Not Available | Negative | 5616625 - 5618526 | 68535.2 |
| ribosomal protein s12 methylthiotransferase | BK659_24990 | Not Available | Positive | 5618850 - 5620184 | 49481.3 |
| gnat family n-acetyltransferase | BK659_24995 | Not Available | Positive | 5620300 - 5620773 | 18176.8 |
| rna-binding protein | BK659_25000 | Not Available | Positive | 5620964 - 5621674 | 26304.0 |
| hypothetical protein | BK659_25005 | Not Available | Positive | 5621742 - 5622209 | 17854.9 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | BK659_25010 | Not Available | Positive | 5622486 - 5623184 | 25835.2 |
| ferredoxin--nadp(+) reductase | BK659_25015 | Not Available | Negative | 5623358 - 5624137 | 29696.6 |
| lysr family transcriptional regulator | BK659_25020 | Not Available | Positive | 5624287 - 5625213 | 34221.1 |
| diacylglycerol kinase | BK659_25025 | Not Available | Negative | 5625210 - 5625572 | 12835.2 |
| dna-binding response regulator | BK659_25030 | Not Available | Negative | 5625648 - 5626298 | 23552.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
