Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | BK659_24935 | Not Available | Positive | 5604668 - 5604877 | 7713.08 |
| dna base-flipping protein ybaz | BK659_24940 | Not Available | Positive | 5605035 - 5605388 | 12823.3 |
| ampg family muropeptide mfs transporter | BK659_24945 | Not Available | Positive | 5605432 - 5606994 | 56651.6 |
| proline--trna ligase | BK659_24950 | Not Available | Positive | 5607124 - 5608839 | 63110.7 |
| hypothetical protein | BK659_24955 | Not Available | Positive | 5608857 - 5609810 | 35941.5 |
| dna polymerase iv | BK659_24960 | Not Available | Negative | 5609899 - 5610960 | 39591.5 |
| Trna-met | Not Available | Not Available | Positive | 5611260 - 5611336 | Not Available |
| hypothetical protein | BK659_24970 | Not Available | Positive | 5611615 - 5614257 | 96679.6 |
| virulence factor family protein | BK659_24975 | Not Available | Positive | 5614257 - 5615552 | 46966.0 |
| hypothetical protein | BK659_24980 | Not Available | Positive | 5616143 - 5616469 | 11752.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
