Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | BK659_24835 | Not Available | Negative | 5583743 - 5584390 | 24630.0 |
| hypothetical protein | BK659_24840 | Not Available | Negative | 5584431 - 5585477 | 36211.1 |
| esta family serine hydrolase | BK659_24845 | Not Available | Negative | 5585623 - 5586768 | 41199.1 |
| beta-agarase | BK659_24850 | Not Available | Negative | 5586907 - 5589279 | 86388.3 |
| atp-dependent dna helicase ding | BK659_24855 | Not Available | Negative | 5589374 - 5591518 | 78860.2 |
| hypothetical protein | BK659_24860 | Not Available | Positive | 5591618 - 5592082 | 17166.1 |
| collagen pro alpha-chain precursor | BK659_24865 | Not Available | Negative | 5592251 - 5593009 | 25257.2 |
| hypothetical protein | BK659_24870 | Not Available | Negative | 5593002 - 5593280 | 10352.2 |
| hypothetical protein | BK659_24875 | Not Available | Positive | 5593532 - 5594029 | 18511.1 |
| hypothetical protein | BK659_24880 | Not Available | Positive | 5594034 - 5594510 | 17244.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
