Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_24785 | Not Available | Negative | 5574305 - 5575213 | 34139.2 |
| short chain dehydrogenase | BK659_24790 | Not Available | Positive | 5575318 - 5575917 | 21188.5 |
| hypothetical protein | BK659_24795 | Not Available | Positive | 5576079 - 5576753 | 24376.9 |
| hypothetical protein | BK659_24800 | Not Available | Positive | 5576865 - 5578478 | 58296.0 |
| cysteine synthase | BK659_24805 | Not Available | Negative | 5578602 - 5579696 | 40088.6 |
| na(+)/h(+) antiporter nhaa | BK659_24810 | Not Available | Positive | 5579980 - 5581167 | 41303.4 |
| toxin | BK659_24815 | Not Available | Positive | 5581291 - 5582514 | 44029.2 |
| cloacin | BK659_24820 | Not Available | Positive | 5582522 - 5582776 | 9719.38 |
| hypothetical protein | BK659_24825 | Not Available | Negative | 5582868 - 5583332 | 15711.9 |
| 30s ribosomal protein s3 | BK659_24830 | Not Available | Positive | 5583501 - 5583737 | 9215.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
