Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine abc transporter subunit substrate-binding protein livk | BK659_24735 | Not Available | Positive | 5561061 - 5562188 | 39820.5 |
| branched-chain amino acid abc transporter permease livh | BK659_24740 | Not Available | Positive | 5562420 - 5563343 | 32523.9 |
| high-affinity branched-chain amino acid abc transporter permease livm | BK659_24745 | Not Available | Positive | 5563340 - 5564596 | 45646.8 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | BK659_24750 | Not Available | Positive | 5564593 - 5565360 | 28246.4 |
| abc transporter atp-binding protein | BK659_24755 | Not Available | Positive | 5565361 - 5566062 | 25530.2 |
| hypothetical protein | BK659_24760 | Not Available | Positive | 5566267 - 5571525 | 194647.0 |
| hypothetical protein | BK659_24765 | Not Available | Positive | 5571662 - 5571970 | 10177.2 |
| hypothetical protein | BK659_24770 | Not Available | Positive | 5571993 - 5572886 | 32940.4 |
| duf2063 domain-containing protein | BK659_24775 | Not Available | Positive | 5572883 - 5573656 | 27812.7 |
| hypothetical protein | BK659_24780 | Not Available | Positive | 5573653 - 5574165 | 18850.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
