Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | BK659_24635 | Not Available | Negative | 5534323 - 5534715 | 14769.7 |
| 3-oxoadipate enol-lactonase | BK659_24640 | Not Available | Negative | 5534726 - 5535526 | 28635.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | BK659_24645 | Not Available | Negative | 5535539 - 5536900 | 48668.0 |
| alpha-ketoglutarate permease | BK659_24650 | Not Available | Negative | 5536949 - 5538244 | 47095.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | BK659_24655 | Not Available | Negative | 5538599 - 5539165 | 20663.4 |
| protocatechuate 3,4-dioxygenase subunit beta | BK659_24660 | Not Available | Negative | 5539167 - 5539871 | 26439.1 |
| 3-oxoadipyl-coa thiolase | BK659_24665 | Not Available | Negative | 5539912 - 5541114 | 41638.2 |
| 3-oxoadipate--succinyl-coa transferase subunit b | BK659_24670 | Not Available | Negative | 5541114 - 5541893 | 27010.3 |
| 3-oxoadipate--succinyl-coa transferase subunit a | BK659_24675 | Not Available | Negative | 5541893 - 5542750 | 30936.9 |
| 4-hydroxybenzoate transporter | BK659_24680 | Not Available | Negative | 5542945 - 5544291 | 47292.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
