Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp phosphodiesterase | BK659_24535 | Not Available | Negative | 5510878 - 5511453 | 21865.2 |
| transcriptional regulator | BK659_24540 | Not Available | Positive | 5511623 - 5511928 | 11567.7 |
| mfs transporter | BK659_24545 | Not Available | Positive | 5511963 - 5513129 | 39576.7 |
| alkene reductase | BK659_24550 | Not Available | Positive | 5513152 - 5514201 | 37503.4 |
| hypothetical protein | BK659_24555 | Not Available | Positive | 5514452 - 5515084 | 24387.4 |
| hypothetical protein | BK659_24560 | Not Available | Positive | 5515183 - 5515836 | 24756.2 |
| tetr family transcriptional regulator | BK659_24565 | Not Available | Negative | 5516115 - 5516753 | 24238.0 |
| hypothetical protein | BK659_24570 | Not Available | Positive | 5516787 - 5516996 | 7754.68 |
| efflux transporter periplasmic adaptor subunit | BK659_24575 | Not Available | Positive | 5517019 - 5518176 | 41074.1 |
| multidrug efflux rnd transporter permease | BK659_24580 | Not Available | Positive | 5518180 - 5521347 | 113295.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
