Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| folate-binding protein ygfz | BK659_24230 | Not Available | Positive | 5452500 - 5453441 | 33904.8 |
| histidine kinase | BK659_24235 | Not Available | Positive | 5453478 - 5454299 | 30500.9 |
| histidine kinase | BK659_24240 | Not Available | Negative | 5454419 - 5455804 | 50657.1 |
| dna-binding response regulator | BK659_24245 | Not Available | Negative | 5455797 - 5456468 | 24611.9 |
| porin | BK659_24250 | Not Available | Positive | 5456702 - 5457994 | 46770.8 |
| tricarboxylic transporter | BK659_24255 | Not Available | Positive | 5458116 - 5459105 | 35335.5 |
| hypothetical protein | BK659_24260 | Not Available | Positive | 5459164 - 5459622 | 16679.3 |
| tripartite tricarboxylate transporter tcta | BK659_24265 | Not Available | Positive | 5459624 - 5461138 | 52959.8 |
| hypothetical protein | BK659_24270 | Not Available | Positive | 5461131 - 5462168 | 37492.8 |
| uracil-dna glycosylase | BK659_24275 | Not Available | Negative | 5462266 - 5462958 | 25841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
