Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator sira | BK659_24180 | Not Available | Negative | 5443841 - 5444080 | 8712.43 |
| peptidase m48 | BK659_24185 | Not Available | Positive | 5444178 - 5445611 | 53187.6 |
| serine peptidase | BK659_24190 | Not Available | Negative | 5445676 - 5447103 | 50344.8 |
| hypothetical protein | BK659_24195 | Not Available | Positive | 5447138 - 5447335 | 7380.03 |
| rna polymerase subunit sigma | BK659_24200 | Not Available | Negative | 5447355 - 5448308 | 34895.4 |
| rna polymerase subunit sigma | BK659_24205 | Not Available | Negative | 5448317 - 5448904 | 20961.8 |
| rna polymerase sigma factor rpoe | BK659_24210 | Not Available | Negative | 5448936 - 5449517 | 22225.3 |
| l-aspartate oxidase | BK659_24215 | Not Available | Positive | 5450075 - 5451691 | 59662.8 |
| hypothetical protein | BK659_24220 | Not Available | Negative | 5451660 - 5452112 | 17335.3 |
| hypothetical protein | BK659_24225 | Not Available | Negative | 5452096 - 5452350 | 10317.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
