Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_24080 | Not Available | Negative | 5422555 - 5423106 | 19649.5 |
| lysr family transcriptional regulator | BK659_24085 | Not Available | Negative | 5423436 - 5424398 | 35721.7 |
| histidine ammonia-lyase | BK659_24090 | Not Available | Positive | 5424571 - 5426112 | 55839.1 |
| histidine ammonia-lyase | BK659_24095 | Not Available | Positive | 5426528 - 5428066 | 54596.9 |
| abc transporter substrate-binding protein | BK659_24100 | Not Available | Positive | 5428696 - 5429553 | 30791.2 |
| abc transporter permease | BK659_24105 | Not Available | Positive | 5429620 - 5430336 | 25752.2 |
| abc transporter permease | BK659_24110 | Not Available | Positive | 5430358 - 5431095 | 27240.1 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK659_24115 | Not Available | Positive | 5431114 - 5431905 | 29148.2 |
| gntr family transcriptional regulator | BK659_24120 | Not Available | Negative | 5432028 - 5433530 | 53929.0 |
| hypothetical protein | BK659_24125 | Not Available | Positive | 5433623 - 5435194 | 57943.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
