Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | BK659_24030 | Not Available | Negative | 5412518 - 5413228 | 26041.4 |
| glycosyltransferase | BK659_24035 | Not Available | Negative | 5413232 - 5414200 | 36530.1 |
| hypothetical protein | BK659_24040 | Not Available | Negative | 5414470 - 5414661 | 7233.61 |
| hypothetical protein | BK659_24045 | Not Available | Negative | 5415083 - 5416006 | 34260.5 |
| hypothetical protein | BK659_24050 | Not Available | Positive | 5416507 - 5417115 | 22880.4 |
| hypothetical protein | BK659_24055 | Not Available | Positive | 5417112 - 5418644 | 55942.9 |
| taurine catabolism dioxygenase taud | BK659_24060 | Not Available | Positive | 5418657 - 5419526 | 32790.6 |
| marr family transcriptional regulator | BK659_24065 | Not Available | Negative | 5419686 - 5420339 | 24130.9 |
| mfs transporter | BK659_24070 | Not Available | Positive | 5420459 - 5421877 | 49502.7 |
| fis family transcriptional regulator | BK659_24075 | Not Available | Positive | 5422132 - 5422434 | 11037.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
